PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64380.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 170aa    MW: 19216.8 Da    PI: 9.7265
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64380.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-122972755
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                  Er+RR++i++++  Lr+l+P+ +      K++ a++L  A eYIk+L+
  EPS64380.1 29 VTERNRRKKIKDRMLALRSLVPNiS------KMDRAATLGDAAEYIKELE 72
                67*********************66......****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.9E-161483IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.4342271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.7E-152489IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.30E-102476No hitNo description
PfamPF000101.8E-92872IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-132877IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MPSTSSSLST EGRNGSEEKG RTYKSKNLVT ERNRRKKIKD RMLALRSLVP NISKMDRAAT  60
LGDAAEYIKE LEEANRIYLQ HITTIEEEEE SRKNHHISVI PEIIIRQTQP EVRKGIFSQL  120
IQAVDSSGLK VVNANATTWN GSSLYAFRVE ATSVEVDLDM LRRSLISLIT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080803.11e-37PREDICTED: transcription factor bHLH90
TrEMBLS8CBZ11e-121S8CBZ1_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99292227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12860.17e-20bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]